Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit i | PviCFBP13515_03380 | Not Available | Positive | 737115 - 738707 | 58759.1 |
| cytochrome c oxidase assembly protein | PviCFBP13515_03385 | Not Available | Positive | 738715 - 739293 | 21589.3 |
| cytochrome c oxidase subunit 3 | PviCFBP13515_03390 | Not Available | Positive | 739295 - 740185 | 33827.5 |
| twin transmembrane helix small protein | PviCFBP13515_03395 | Not Available | Negative | 740310 - 740504 | 6959.87 |
| cytochrome oxidase biogenesis protein surf1,facilitates heme a insertion | PviCFBP13515_03400 | Not Available | Positive | 740579 - 741328 | 28527.4 |
| hypothetical protein | PviCFBP13515_03405 | Not Available | Positive | 741294 - 741878 | 21852.8 |
| cytochrome b | PviCFBP13515_03410 | Not Available | Positive | 741891 - 742949 | 37802.1 |
| protoheme ix farnesyltransferase | PviCFBP13515_03415 | Not Available | Positive | 742946 - 743845 | 33165.8 |
| sco family protein | PviCFBP13515_03420 | Not Available | Positive | 743842 - 744474 | 22869.9 |
| abc transporter substrate-binding protein | PviCFBP13515_03430 | Not Available | Negative | 744772 - 745545 | 27815.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
