Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13515_00190 | Not Available | Positive | 33885 - 34778 | 33674.8 |
| diguanylate cyclase adra | PviCFBP13515_00195 | Not Available | Negative | 34783 - 35859 | 39670.3 |
| mfs transporter | PviCFBP13515_00200 | Not Available | Negative | 36113 - 37327 | 41490.9 |
| lysr family transcriptional regulator | PviCFBP13515_00205 | Not Available | Positive | 37437 - 38345 | 32670.4 |
| polyribonucleotide nucleotidyltransferase | PviCFBP13515_00210 | Not Available | Negative | 38358 - 38948 | 20034.4 |
| topoisomerase | PviCFBP13515_00215 | Not Available | Negative | 39456 - 39827 | 13625.7 |
| chemotaxis protein | PviCFBP13515_00220 | Not Available | Positive | 40043 - 41608 | 56530.9 |
| hypothetical protein | PviCFBP13515_00225 | Not Available | Negative | 42001 - 42189 | 7429.07 |
| type vi secretion system tube protein hcp | PviCFBP13515_00235 | Not Available | Negative | 43353 - 43838 | 17937.3 |
| hypothetical protein | PviCFBP13515_00240 | Not Available | Positive | 44128 - 44844 | 26802.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
