Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para family protein | PviCFBP13515_03080 | Not Available | Negative | 676557 - 677348 | 28878.2 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | PviCFBP13515_03085 | Not Available | Negative | 677367 - 678014 | 23838.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | PviCFBP13515_03090 | Not Available | Negative | 678020 - 679912 | 69255.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | PviCFBP13515_03095 | Not Available | Negative | 680576 - 681946 | 48796.0 |
| membrane protein insertase yidc | PviCFBP13515_03100 | Not Available | Negative | 682026 - 683711 | 61809.0 |
| membrane protein insertion efficiency factor yidd | PviCFBP13515_03105 | Not Available | Negative | 683714 - 683959 | 9176.15 |
| ribonuclease p protein component | PviCFBP13515_03110 | Not Available | Negative | 683952 - 684353 | 15124.4 |
| 50s ribosomal protein l34 | PviCFBP13515_03115 | Not Available | Negative | 684370 - 684504 | 5124.46 |
| chromosomal replication initiator protein dnaa | PviCFBP13515_03120 | Not Available | Positive | 685089 - 686621 | 57009.1 |
| dna polymerase iii subunit beta | PviCFBP13515_03125 | Not Available | Positive | 686660 - 687763 | 40572.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
