Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit epsilon | PviCFBP13515_03030 | Not Available | Negative | 668407 - 668832 | 14761.8 |
| f0f1 atp synthase subunit beta | PviCFBP13515_03035 | Not Available | Negative | 668877 - 670256 | 49654.4 |
| atp synthase subunit gamma | PviCFBP13515_03040 | Not Available | Negative | 670284 - 671144 | 31426.0 |
| atp synthase subunit alpha | PviCFBP13515_03045 | Not Available | Negative | 671195 - 672739 | 55372.5 |
| atp synthase subunit delta | PviCFBP13515_03050 | Not Available | Negative | 672761 - 673297 | 19342.2 |
| f0f1 atp synthase subunit b | PviCFBP13515_03055 | Not Available | Negative | 673310 - 673780 | 16983.4 |
| atp synthase subunit c | PviCFBP13515_03060 | Not Available | Negative | 673838 - 674095 | 8609.06 |
| atp synthase subunit a | PviCFBP13515_03065 | Not Available | Negative | 674235 - 675104 | 31774.5 |
| f0f1 atp synthase subunit i | PviCFBP13515_03070 | Not Available | Negative | 675121 - 675528 | 14854.8 |
| parb/repb/spo0j family partition protein | PviCFBP13515_03075 | Not Available | Negative | 675675 - 676547 | 32278.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
