Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13515_02920 | Not Available | Negative | 647194 - 647457 | 9802.14 |
| hypothetical protein | PviCFBP13515_02925 | Not Available | Negative | 647516 - 647740 | 8671.25 |
| manganese catalase family protein | PviCFBP13515_02930 | Not Available | Positive | 648170 - 649051 | 31453.1 |
| hypothetical protein | PviCFBP13515_02935 | Not Available | Positive | 649088 - 649267 | 6510.93 |
| duf4142 domain-containing protein | PviCFBP13515_02940 | Not Available | Negative | 649457 - 649972 | 18492.0 |
| cina family protein | PviCFBP13515_02945 | Not Available | Positive | 650229 - 650714 | 17505.8 |
| iron-containing redox enzyme family protein | PviCFBP13515_02950 | Not Available | Positive | 650860 - 652311 | 54272.3 |
| sam-dependent methyltransferase | PviCFBP13515_02955 | Not Available | Positive | 652308 - 653252 | 34473.8 |
| tonb-dependent siderophore receptor | PviCFBP13515_02960 | Not Available | Positive | 653628 - 655580 | 71952.4 |
| abc transporter atp-binding protein | PviCFBP13515_02965 | Not Available | Positive | 655580 - 656359 | 28606.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
