Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13515_02870 | Not Available | Positive | 631870 - 633171 | 47274.0 |
| hypothetical protein | PviCFBP13515_02875 | Not Available | Positive | 633182 - 634510 | 50021.7 |
| acyltransferase | PviCFBP13515_02880 | Not Available | Positive | 634658 - 636541 | 69519.3 |
| dna-binding response regulator | PviCFBP13515_02885 | Not Available | Negative | 636741 - 637379 | 23308.3 |
| sensor histidine kinase | PviCFBP13515_02890 | Not Available | Negative | 637379 - 638443 | 37776.4 |
| nitrate abc transporter atp-binding protein | PviCFBP13515_02895 | Not Available | Negative | 638495 - 639796 | 47941.1 |
| sulfonate abc transporter permease | PviCFBP13515_02900 | Not Available | Negative | 639822 - 641576 | 63867.2 |
| hypothetical protein | PviCFBP13515_02905 | Not Available | Positive | 641824 - 642609 | 29698.5 |
| methyl-accepting chemotaxis protein | PviCFBP13515_02910 | Not Available | Negative | 642661 - 644574 | 68697.6 |
| methyl-accepting chemotaxis protein | PviCFBP13515_02915 | Not Available | Negative | 644834 - 646864 | 72666.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
