Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside deaminase | PviCFBP13515_00135 | Not Available | Positive | 21410 - 21847 | 16166.4 |
| alpha/beta hydrolase | PviCFBP13515_00140 | Not Available | Positive | 22361 - 23182 | 29837.4 |
| pas domain s-box protein | PviCFBP13515_00145 | Not Available | Positive | 23172 - 24347 | 43423.5 |
| histidine kinase | PviCFBP13515_00150 | Not Available | Positive | 24578 - 25789 | 43474.1 |
| hypothetical protein | PviCFBP13515_00155 | Not Available | Positive | 25963 - 26283 | 11464.3 |
| oxidoreductase | PviCFBP13515_00160 | Not Available | Positive | 26338 - 27504 | 42764.8 |
| peptidase m4 | PviCFBP13515_00165 | Not Available | Negative | 27602 - 27910 | 11009.9 |
| tonb-dependent siderophore receptor | PviCFBP13515_00170 | Not Available | Positive | 28197 - 30368 | 79510.1 |
| mfs transporter | PviCFBP13515_00175 | Not Available | Positive | 30915 - 32231 | 47379.5 |
| hypothetical protein | PviCFBP13515_00185 | Not Available | Positive | 33095 - 33814 | 27431.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
