Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | PviCFBP13515_02770 | Not Available | Positive | 610267 - 610851 | 21371.6 |
| aldehyde dehydrogenase iron-sulfur subunit | PviCFBP13515_02775 | Not Available | Positive | 611005 - 611670 | 23261.7 |
| molybdopterin dehydrogenase | PviCFBP13515_02780 | Not Available | Positive | 611667 - 612617 | 33322.1 |
| xanthine dehydrogenase | PviCFBP13515_02785 | Not Available | Positive | 612696 - 614906 | 78485.6 |
| lysr family transcriptional regulator | PviCFBP13515_02790 | Not Available | Positive | 614934 - 615848 | 33402.6 |
| 4-carboxymuconolactone decarboxylase | PviCFBP13515_02795 | Not Available | Negative | 615857 - 616648 | 28373.1 |
| cupin domain-containing protein | PviCFBP13515_02800 | Not Available | Negative | 616645 - 617046 | 14269.8 |
| arac family transcriptional regulator | PviCFBP13515_02805 | Not Available | Negative | 617196 - 618203 | 37545.8 |
| hypothetical protein | PviCFBP13515_02810 | Not Available | Positive | 618427 - 618864 | 16528.9 |
| methyl-accepting chemotaxis protein | PviCFBP13515_02815 | Not Available | Positive | 618986 - 620275 | 46601.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
