Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cryptochrome/photolyase family protein | PviCFBP13515_02720 | Not Available | Positive | 602043 - 603581 | 58487.7 |
| duf2256 domain-containing protein | PviCFBP13515_02725 | Not Available | Positive | 603578 - 603727 | 5872.19 |
| nad-dependent dehydratase | PviCFBP13515_02730 | Not Available | Positive | 603806 - 604867 | 38947.1 |
| cytoplasmic protein | PviCFBP13515_02735 | Not Available | Positive | 605002 - 605502 | 18554.8 |
| hypothetical protein | PviCFBP13515_02740 | Not Available | Positive | 605502 - 605957 | 16900.1 |
| hypothetical protein | PviCFBP13515_02745 | Not Available | Positive | 606019 - 606390 | 13190.7 |
| hypothetical protein | PviCFBP13515_02750 | Not Available | Negative | 606398 - 606976 | 21552.8 |
| hypothetical protein | PviCFBP13515_02755 | Not Available | Positive | 607600 - 608028 | 15443.2 |
| sorbosone dehydrogenase family protein | PviCFBP13515_02760 | Not Available | Positive | 608025 - 609317 | 46123.5 |
| oxidoreductase | PviCFBP13515_02765 | Not Available | Negative | 609402 - 610154 | 26597.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
