Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | PviCFBP13515_02670 | Not Available | Positive | 586673 - 589675 | 103965.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | PviCFBP13515_02675 | Not Available | Positive | 589768 - 592881 | 107139.0 |
| tonb-dependent siderophore receptor | PviCFBP13515_02680 | Not Available | Positive | 593497 - 595659 | 79212.0 |
| aspartate carbamoyltransferase | PviCFBP13515_02685 | Not Available | Negative | 595693 - 596964 | 46869.9 |
| nad(+) synthase | PviCFBP13515_02690 | Not Available | Negative | 597267 - 598103 | 28903.6 |
| nicotinate phosphoribosyltransferase | PviCFBP13515_02695 | Not Available | Negative | 598111 - 599316 | 45925.6 |
| nicotinamidase | PviCFBP13515_02700 | Not Available | Negative | 599333 - 599974 | 23069.7 |
| cytidyltransferase | PviCFBP13515_02705 | Not Available | Positive | 600173 - 600718 | 19747.7 |
| nudix hydrolase | PviCFBP13515_02710 | Not Available | Positive | 600720 - 601433 | 26829.2 |
| nudix hydrolase | PviCFBP13515_02715 | Not Available | Positive | 601466 - 602005 | 19123.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
