Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | PviCFBP13515_02620 | Not Available | Negative | 554791 - 555492 | 26493.4 |
| hypothetical protein | PviCFBP13515_02625 | Not Available | Positive | 555715 - 556137 | 15876.2 |
| type iii effector hrpk | PviCFBP13515_02630 | Not Available | Positive | 556547 - 559546 | 106274.0 |
| esterase | PviCFBP13515_02635 | Not Available | Negative | 559614 - 560567 | 34676.4 |
| n-acetyltransferase | PviCFBP13515_02640 | Not Available | Positive | 560802 - 561344 | 20405.3 |
| taurine dioxygenase | PviCFBP13515_02645 | Not Available | Negative | 561487 - 562356 | 32073.3 |
| mbth family protein | PviCFBP13515_02650 | Not Available | Negative | 562412 - 562600 | 6998.2 |
| non-ribosomal peptide synthetase | PviCFBP13515_02655 | Not Available | Negative | 562587 - 571814 | 337798.0 |
| non-ribosomal peptide synthetase | PviCFBP13515_02660 | Not Available | Negative | 571814 - 575926 | 151078.0 |
| non-ribosomal peptide synthetase | PviCFBP13515_02665 | Not Available | Negative | 575923 - 585633 | 357341.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
