Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | PviCFBP13515_02565 | Not Available | Positive | 544738 - 545394 | 24562.7 |
| hypothetical protein | PviCFBP13515_02570 | Not Available | Negative | 545784 - 546269 | 18941.4 |
| hypothetical protein | PviCFBP13515_02575 | Not Available | Positive | 546573 - 546995 | 15822.8 |
| hypothetical protein | PviCFBP13515_02585 | Not Available | Negative | 547533 - 547895 | 13584.6 |
| hypothetical protein | PviCFBP13515_02590 | Not Available | Negative | 547938 - 549155 | 44920.5 |
| alpha/beta hydrolase | PviCFBP13515_02595 | Not Available | Negative | 549709 - 550743 | 36636.1 |
| hypothetical protein | PviCFBP13515_02600 | Not Available | Negative | 550948 - 551331 | 13827.4 |
| alkene reductase | PviCFBP13515_02605 | Not Available | Negative | 551476 - 552579 | 40050.4 |
| lysr family transcriptional regulator | PviCFBP13515_02610 | Not Available | Positive | 552682 - 553653 | 35655.1 |
| tetr/acrr family transcriptional regulator | PviCFBP13515_02615 | Not Available | Negative | 553978 - 554541 | 20611.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
