Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antibiotic biosynthesis monooxygenase | PviCFBP13515_02515 | Not Available | Negative | 533513 - 533881 | 13399.1 |
| outer membrane porin, oprd family | PviCFBP13515_02520 | Not Available | Negative | 534119 - 535360 | 45361.1 |
| acetyl/propionyl-coa carboxylase subunit alpha | PviCFBP13515_02525 | Not Available | Negative | 535511 - 537247 | 61857.3 |
| allophanate hydrolase | PviCFBP13515_02530 | Not Available | Negative | 537244 - 538845 | 56320.7 |
| putative hydro-lyase | PviCFBP13515_02535 | Not Available | Negative | 538855 - 539649 | 28718.3 |
| lamb/ycsf family protein | PviCFBP13515_02540 | Not Available | Negative | 539646 - 540416 | 26802.1 |
| divalent metal cation transporter | PviCFBP13515_02545 | Not Available | Negative | 540434 - 541666 | 42861.7 |
| gntr family transcriptional regulator | PviCFBP13515_02550 | Not Available | Positive | 541921 - 542589 | 24759.9 |
| chromate transporter | PviCFBP13515_02555 | Not Available | Positive | 542636 - 543994 | 48858.4 |
| tetr/acrr family transcriptional regulator | PviCFBP13515_02560 | Not Available | Negative | 543991 - 544566 | 20764.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
