Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | PviCFBP13515_02465 | Not Available | Negative | 523416 - 524522 | 37843.3 |
| tetr family transcriptional regulator | PviCFBP13515_02470 | Not Available | Negative | 524598 - 525212 | 22721.3 |
| rnd transporter | PviCFBP13515_02475 | Not Available | Positive | 525300 - 526757 | 51202.6 |
| peptide abc transporter atp-binding protein | PviCFBP13515_02480 | Not Available | Positive | 526907 - 527650 | 27906.7 |
| alcohol dehydrogenase | PviCFBP13515_02485 | Not Available | Positive | 528109 - 529041 | 33079.4 |
| yafy family transcriptional regulator | PviCFBP13515_02490 | Not Available | Positive | 529044 - 529748 | 26622.4 |
| transcriptional regulator gcva | PviCFBP13515_02495 | Not Available | Negative | 529766 - 530653 | 32501.3 |
| eama family transporter | PviCFBP13515_02500 | Not Available | Positive | 530789 - 531631 | 29122.5 |
| trna (adenine-n(1))-methyltransferase | PviCFBP13515_02505 | Not Available | Negative | 531628 - 532329 | 25997.7 |
| nadph:quinone reductase | PviCFBP13515_02510 | Not Available | Negative | 532526 - 533431 | 31295.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
