Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | PviCFBP13515_02365 | Not Available | Negative | 502635 - 503078 | 16341.7 |
| duf3592 domain-containing protein | PviCFBP13515_02370 | Not Available | Positive | 503167 - 503604 | 15403.3 |
| duf3144 domain-containing protein | PviCFBP13515_02375 | Not Available | Positive | 503775 - 504071 | 11443.3 |
| hypothetical protein | PviCFBP13515_02380 | Not Available | Negative | 504120 - 504599 | 17893.3 |
| alpha/beta hydrolase | PviCFBP13515_02385 | Not Available | Positive | 504825 - 505766 | 34882.1 |
| mfs transporter | PviCFBP13515_02390 | Not Available | Negative | 505806 - 506951 | 39897.8 |
| tetr family transcriptional regulator | PviCFBP13515_02395 | Not Available | Positive | 507121 - 507747 | 22688.1 |
| hypothetical protein | PviCFBP13515_02400 | Not Available | Negative | 507795 - 508595 | 30627.1 |
| 2og-fe(ii) oxygenase | PviCFBP13515_02405 | Not Available | Positive | 509036 - 510577 | 56144.4 |
| hypothetical protein | PviCFBP13515_02410 | Not Available | Positive | 510714 - 510977 | 9791.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
