Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide bond formation protein dsba | PviCFBP13515_00085 | Not Available | Negative | 14609 - 15241 | 23903.7 |
| duf2177 domain-containing protein | PviCFBP13515_00090 | Not Available | Positive | 15395 - 15796 | 14227.8 |
| hypothetical protein | PviCFBP13515_00095 | Not Available | Negative | 16054 - 16434 | 14610.7 |
| csbd family protein | PviCFBP13515_00100 | Not Available | Positive | 16680 - 16871 | 6458.65 |
| yihy/virulence factor brkb family protein | PviCFBP13515_00105 | Not Available | Positive | 17098 - 18087 | 36323.0 |
| peptide deformylase | PviCFBP13515_00110 | Not Available | Positive | 18115 - 18654 | 20115.3 |
| gnat family n-acetyltransferase | PviCFBP13515_00115 | Not Available | Negative | 18664 - 19074 | 15324.6 |
| abc transporter substrate-binding protein | PviCFBP13515_00120 | Not Available | Positive | 19230 - 20243 | 36650.9 |
| n-acetyltransferase | PviCFBP13515_00125 | Not Available | Positive | 20251 - 20778 | 19531.4 |
| hypothetical protein | PviCFBP13515_00130 | Not Available | Positive | 20878 - 21378 | 18277.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
