Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | PviCFBP13515_02215 | Not Available | Negative | 466631 - 467590 | 36254.8 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | PviCFBP13515_02220 | Not Available | Negative | 467587 - 468330 | 27629.4 |
| peptidase inhibitor i42 | PviCFBP13515_02225 | Not Available | Negative | 468443 - 468835 | 13927.8 |
| endopeptidase la | PviCFBP13515_02230 | Not Available | Negative | 469030 - 471447 | 89204.6 |
| methylamine utilization protein | PviCFBP13515_02235 | Not Available | Positive | 471631 - 472308 | 24468.1 |
| hypothetical protein | PviCFBP13515_02240 | Not Available | Positive | 472305 - 474659 | 85143.0 |
| duf3034 domain-containing protein | PviCFBP13515_02245 | Not Available | Positive | 474663 - 475526 | 31085.6 |
| group 1 truncated hemoglobin | PviCFBP13515_02250 | Not Available | Positive | 475526 - 475948 | 15714.4 |
| fcd domain-containing protein | PviCFBP13515_02255 | Not Available | Negative | 476204 - 477283 | 40179.4 |
| amidase | PviCFBP13515_02260 | Not Available | Positive | 477547 - 478920 | 48054.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
