Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea carboxylase-associated family protein | PviCFBP13515_02060 | Not Available | Negative | 438029 - 438754 | 26675.8 |
| lauroyl acyltransferase | PviCFBP13515_02065 | Not Available | Negative | 438751 - 439533 | 28947.9 |
| abc transporter permease | PviCFBP13515_02070 | Not Available | Negative | 439530 - 440345 | 29857.0 |
| lipid kinase | PviCFBP13515_02075 | Not Available | Negative | 440373 - 441446 | 37987.4 |
| hypothetical protein | PviCFBP13515_02085 | Not Available | Positive | 442000 - 442434 | 16456.0 |
| enoyl-coa hydratase/isomerase family protein | PviCFBP13515_02090 | Not Available | Negative | 442651 - 443763 | 40864.1 |
| uracil-dna glycosylase | PviCFBP13515_02095 | Not Available | Positive | 443931 - 444623 | 25897.9 |
| hypothetical protein | PviCFBP13515_02100 | Not Available | Negative | 444628 - 445662 | 37233.8 |
| tripartite tricarboxylate transporter permease | PviCFBP13515_02105 | Not Available | Negative | 445655 - 447169 | 53071.0 |
| tripartite tricarboxylate transporter tctb family protein | PviCFBP13515_02110 | Not Available | Negative | 447172 - 447630 | 16576.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
