Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | PviCFBP13515_02010 | Not Available | Negative | 422014 - 425040 | 103899.0 |
| hypothetical protein | PviCFBP13515_02015 | Not Available | Positive | 425326 - 425826 | 18143.8 |
| Trna-gly | Not Available | Not Available | Positive | 426045 - 426118 | Not Available |
| alpha/beta hydrolase | PviCFBP13515_02025 | Not Available | Negative | 426275 - 427168 | 33563.9 |
| 16s rrna pseudouridine(516) synthase | PviCFBP13515_02030 | Not Available | Negative | 427468 - 428160 | 26671.1 |
| helicase | PviCFBP13515_02035 | Not Available | Negative | 428206 - 428427 | 7842.35 |
| hypothetical protein | PviCFBP13515_02040 | Not Available | Negative | 428463 - 431708 | 120350.0 |
| allophanate hydrolase | PviCFBP13515_02045 | Not Available | Negative | 431803 - 433611 | 63967.6 |
| urea carboxylase | PviCFBP13515_02050 | Not Available | Negative | 433643 - 437272 | 130579.0 |
| urea carboxylase-associated family protein | PviCFBP13515_02055 | Not Available | Negative | 437393 - 438010 | 22727.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
