Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | PviCFBP13515_01860 | Not Available | Negative | 388584 - 390965 | 87207.9 |
| dna-binding response regulator | PviCFBP13515_01865 | Not Available | Negative | 391187 - 392521 | 49718.1 |
| two-component sensor histidine kinase | PviCFBP13515_01870 | Not Available | Negative | 392528 - 394285 | 65460.8 |
| beta-glucosidase bglx | PviCFBP13515_01875 | Not Available | Negative | 394362 - 396686 | 83922.7 |
| methanol dehydrogenase | PviCFBP13515_01880 | Not Available | Positive | 397003 - 397698 | 24770.1 |
| hypothetical protein | PviCFBP13515_01885 | Not Available | Positive | 397726 - 398343 | 22986.9 |
| toxin | PviCFBP13515_01890 | Not Available | Negative | 398397 - 399407 | 37475.6 |
| binary cytotoxin component | PviCFBP13515_01895 | Not Available | Negative | 399424 - 400578 | 43244.0 |
| sam-dependent methyltransferase | PviCFBP13515_01900 | Not Available | Positive | 400923 - 402143 | 45319.1 |
| eama/rhat family transporter | PviCFBP13515_01905 | Not Available | Negative | 402148 - 403044 | 32092.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
