Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biliverdin-producing heme oxygenase | PviCFBP13515_00035 | Not Available | Negative | 5510 - 6199 | 25668.6 |
| long-chain acyl-coa synthetase | PviCFBP13515_00040 | Not Available | Negative | 6196 - 7689 | 54460.0 |
| thermostable hemolysin | PviCFBP13515_00045 | Not Available | Negative | 7679 - 8356 | 24379.0 |
| atp-dependent helicase | PviCFBP13515_00050 | Not Available | Positive | 8619 - 9956 | 48739.4 |
| transcriptional regulator | PviCFBP13515_00055 | Not Available | Positive | 10254 - 10628 | 13469.5 |
| hypothetical protein | PviCFBP13515_00060 | Not Available | Negative | 10689 - 11561 | 33916.4 |
| hypothetical protein | PviCFBP13515_00065 | Not Available | Negative | 11645 - 12373 | 26461.9 |
| hypothetical protein | PviCFBP13515_00070 | Not Available | Negative | 12521 - 13033 | 18849.3 |
| hypothetical protein | PviCFBP13515_00075 | Not Available | Negative | 13202 - 13381 | 6166.45 |
| gntr family transcriptional regulator | PviCFBP13515_00080 | Not Available | Positive | 13730 - 14566 | 30975.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
