Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | PviCFBP13515_01810 | Not Available | Negative | 376368 - 377519 | 40797.5 |
| tetr family transcriptional regulator | PviCFBP13515_01815 | Not Available | Positive | 377774 - 378427 | 24829.6 |
| duf3396 domain-containing protein | PviCFBP13515_01820 | Not Available | Positive | 378881 - 380014 | 42833.3 |
| mfs transporter | PviCFBP13515_01825 | Not Available | Negative | 380039 - 381535 | 52976.6 |
| hypothetical protein | PviCFBP13515_01830 | Not Available | Positive | 381987 - 382214 | 8076.48 |
| flavin reductase family protein | PviCFBP13515_01835 | Not Available | Negative | 382224 - 382847 | 22390.8 |
| hypothetical protein | PviCFBP13515_01840 | Not Available | Negative | 382976 - 383290 | 10336.1 |
| mfs transporter | PviCFBP13515_01845 | Not Available | Negative | 383667 - 384992 | 48392.0 |
| molecular chaperone dnaj | PviCFBP13515_01850 | Not Available | Negative | 385173 - 386783 | 61329.5 |
| molecular chaperone hscc | PviCFBP13515_01855 | Not Available | Negative | 386804 - 388498 | 62754.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
