Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | PviCFBP13515_01760 | Not Available | Positive | 362132 - 363619 | 53263.1 |
| anion permease | PviCFBP13515_01765 | Not Available | Negative | 363671 - 365143 | 52634.8 |
| hypothetical protein | PviCFBP13515_01770 | Not Available | Negative | 365347 - 365544 | 7886.24 |
| iclr family transcriptional regulator | PviCFBP13515_01775 | Not Available | Positive | 366392 - 367234 | 30901.3 |
| coa transferase subunit a | PviCFBP13515_01780 | Not Available | Positive | 367391 - 368248 | 31053.2 |
| coa-transferase subunit beta | PviCFBP13515_01785 | Not Available | Positive | 368248 - 369027 | 27121.3 |
| 3-oxoadipyl-coa thiolase | PviCFBP13515_01790 | Not Available | Positive | 369027 - 370229 | 41827.5 |
| mfs transporter | PviCFBP13515_01795 | Not Available | Positive | 370372 - 371673 | 47342.3 |
| multidrug transporter | PviCFBP13515_01800 | Not Available | Negative | 371752 - 373212 | 53206.6 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | PviCFBP13515_01805 | Not Available | Negative | 373209 - 376364 | 113140.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
