Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13515_01650 | Not Available | Negative | 340751 - 340951 | 7751.86 |
| hypothetical protein | PviCFBP13515_01655 | Not Available | Positive | 341939 - 342232 | 11478.7 |
| hypothetical protein | PviCFBP13515_01665 | Not Available | Positive | 342886 - 343137 | 9269.44 |
| duf4087 domain-containing protein | PviCFBP13515_01670 | Not Available | Positive | 343329 - 344192 | 31718.0 |
| fumarate hydratase | PviCFBP13515_01675 | Not Available | Negative | 344276 - 345799 | 54812.4 |
| iron-sulfur-binding ferredoxin reductase | PviCFBP13515_01680 | Not Available | Positive | 345979 - 346917 | 34636.8 |
| pyruvate kinase | PviCFBP13515_01685 | Not Available | Negative | 347071 - 348522 | 52112.8 |
| hypothetical protein | PviCFBP13515_01690 | Not Available | Positive | 348699 - 349073 | 14177.0 |
| pilus assembly protein pilz | PviCFBP13515_01695 | Not Available | Positive | 349265 - 349624 | 13771.7 |
| duf58 domain-containing protein | PviCFBP13515_01700 | Not Available | Negative | 349649 - 350992 | 50603.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
