Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | PviCFBP13515_01600 | Not Available | Positive | 327428 - 327766 | 12668.6 |
| ycei family protein | PviCFBP13515_01605 | Not Available | Positive | 327848 - 328429 | 21295.7 |
| cardiolipin synthase b | PviCFBP13515_01610 | Not Available | Positive | 328431 - 329588 | 44549.7 |
| duf3077 domain-containing protein | PviCFBP13515_01615 | Not Available | Negative | 329622 - 329864 | 8769.49 |
| alpha/beta hydrolase | PviCFBP13515_01620 | Not Available | Positive | 330399 - 331286 | 32587.7 |
| atp-binding protein | PviCFBP13515_01625 | Not Available | Positive | 331626 - 336200 | 171659.0 |
| endonuclease | PviCFBP13515_01630 | Not Available | Positive | 336620 - 337810 | 44921.4 |
| hypothetical protein | PviCFBP13515_01635 | Not Available | Negative | 338373 - 338627 | 9749.62 |
| reverse transcriptase | PviCFBP13515_01640 | Not Available | Negative | 338902 - 339669 | 28747.6 |
| hypothetical protein | PviCFBP13515_01645 | Not Available | Negative | 340172 - 340684 | 18749.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
