Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| log family protein | PviCFBP13515_01545 | Not Available | Positive | 312086 - 313459 | 50798.3 |
| arac family transcriptional regulator | PviCFBP13515_01550 | Not Available | Negative | 313509 - 314378 | 32914.6 |
| 4-hydroxybenzoate 3-monooxygenase | PviCFBP13515_01555 | Not Available | Positive | 314528 - 315712 | 44294.0 |
| mfs transporter | PviCFBP13515_01560 | Not Available | Positive | 316055 - 317380 | 48250.1 |
| hypothetical protein | PviCFBP13515_01565 | Not Available | Positive | 317549 - 317899 | 12895.4 |
| hypothetical protein | PviCFBP13515_01570 | Not Available | Positive | 317899 - 318393 | 17790.4 |
| type vi secretion system tip protein vgrg | PviCFBP13515_01575 | Not Available | Positive | 318698 - 320773 | 77126.1 |
| duf4123 domain-containing protein | PviCFBP13515_01580 | Not Available | Positive | 320770 - 321567 | 30817.4 |
| hypothetical protein | PviCFBP13515_01585 | Not Available | Positive | 321564 - 325352 | 139154.0 |
| serine hydrolase | PviCFBP13515_01595 | Not Available | Positive | 326325 - 327431 | 40541.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
