Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13515_01445 | Not Available | Positive | 293775 - 293966 | 6886.33 |
| flagellar hook protein flge | PviCFBP13515_01450 | Not Available | Negative | 294058 - 295386 | 45916.9 |
| flagellar hook assembly protein flgd | PviCFBP13515_01455 | Not Available | Negative | 295415 - 296092 | 23011.8 |
| flagellar basal body rod protein flgc | PviCFBP13515_01460 | Not Available | Negative | 296108 - 296548 | 15606.1 |
| flagellar basal body rod protein flgb | PviCFBP13515_01465 | Not Available | Negative | 296552 - 296959 | 14826.3 |
| protein-glutamate o-methyltransferase cher | PviCFBP13515_01470 | Not Available | Negative | 297460 - 298302 | 31422.0 |
| chemotaxis protein chev | PviCFBP13515_01475 | Not Available | Negative | 298351 - 299277 | 34203.9 |
| flagella basal body p-ring formation protein flga | PviCFBP13515_01480 | Not Available | Positive | 299356 - 300114 | 27915.2 |
| flagellar biosynthesis anti-sigma factor flgm | PviCFBP13515_01485 | Not Available | Positive | 300275 - 300586 | 10893.7 |
| flagellar protein flgn | PviCFBP13515_01490 | Not Available | Positive | 300637 - 301104 | 17055.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
