Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketoacyl-acp synthase iii | PviCFBP13515_01395 | Not Available | Negative | 277132 - 278061 | 32975.2 |
| glycosyl transferase family 2 | PviCFBP13515_01400 | Not Available | Negative | 278354 - 281257 | 106552.0 |
| glycosyl transferase family 2 | PviCFBP13515_01405 | Not Available | Negative | 281397 - 284978 | 133932.0 |
| flagellar hook-associated protein 3 | PviCFBP13515_01410 | Not Available | Negative | 285067 - 286659 | 54909.2 |
| flagellar hook-associated protein flgk | PviCFBP13515_01415 | Not Available | Negative | 286673 - 288733 | 70443.9 |
| flagellar assembly peptidoglycan hydrolase flgj | PviCFBP13515_01420 | Not Available | Negative | 288744 - 289985 | 44170.1 |
| flagellar p-ring protein | PviCFBP13515_01425 | Not Available | Negative | 289996 - 291105 | 38021.9 |
| flagellar basal body l-ring protein flgh | PviCFBP13515_01430 | Not Available | Negative | 291119 - 291835 | 24833.4 |
| flagellar basal-body rod protein flgg | PviCFBP13515_01435 | Not Available | Negative | 291917 - 292705 | 27465.2 |
| flagellar basal body rod protein flgf | PviCFBP13515_01440 | Not Available | Negative | 292752 - 293492 | 26120.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
