Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body m-ring protein flif | PviCFBP13515_01345 | Not Available | Negative | 266322 - 268103 | 63084.8 |
| flagellar hook-basal body complex protein flie | PviCFBP13515_01350 | Not Available | Negative | 268119 - 268454 | 11892.4 |
| sigma-54-dependent fis family transcriptional regulator | PviCFBP13515_01355 | Not Available | Negative | 268702 - 270117 | 50781.6 |
| pas domain-containing sensor histidine kinase | PviCFBP13515_01360 | Not Available | Negative | 270117 - 271331 | 44013.0 |
| sigma-54-dependent fis family transcriptional regulator | PviCFBP13515_01365 | Not Available | Negative | 271454 - 272929 | 55469.9 |
| flagellar protein flit | PviCFBP13515_01370 | Not Available | Negative | 273108 - 273404 | 10807.8 |
| flagella export chaperone flis | PviCFBP13515_01375 | Not Available | Negative | 273433 - 273828 | 14437.6 |
| flagellar hook protein flid | PviCFBP13515_01380 | Not Available | Negative | 273958 - 275418 | 49298.3 |
| flagellar biosynthesis protein flag | PviCFBP13515_01385 | Not Available | Negative | 275498 - 275896 | 14386.0 |
| flagellin flic | PviCFBP13515_01390 | Not Available | Negative | 275963 - 276811 | 29274.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
