Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor switch protein flim | PviCFBP13515_01295 | Not Available | Negative | 256614 - 257582 | 35932.6 |
| flagellar basal body-associated protein flil | PviCFBP13515_01300 | Not Available | Negative | 257592 - 258092 | 17857.2 |
| flagellar hook-length control protein flik | PviCFBP13515_01305 | Not Available | Negative | 258692 - 260101 | 47955.0 |
| hpt domain-containing protein | PviCFBP13515_01310 | Not Available | Negative | 260192 - 260548 | 13498.9 |
| fused response regulator/phosphatase | PviCFBP13515_01315 | Not Available | Negative | 260592 - 262289 | 61752.4 |
| anti-sigma factor antagonist | PviCFBP13515_01320 | Not Available | Negative | 262293 - 262595 | 11168.3 |
| flagella biosynthesis chaperone flij | PviCFBP13515_01325 | Not Available | Negative | 262675 - 263124 | 17466.7 |
| flagellar protein export atpase flii | PviCFBP13515_01330 | Not Available | Negative | 263131 - 264489 | 48373.8 |
| flagellar assembly protein flih | PviCFBP13515_01335 | Not Available | Negative | 264479 - 265297 | 30035.4 |
| flagellar motor switch protein flig | PviCFBP13515_01340 | Not Available | Negative | 265313 - 266329 | 36960.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
