Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2802 domain-containing protein | PviCFBP13515_01195 | Not Available | Negative | 238008 - 238409 | 14607.8 |
| chemotaxis protein chew | PviCFBP13515_01200 | Not Available | Negative | 238410 - 238889 | 17626.0 |
| chemotaxis protein chew | PviCFBP13515_01205 | Not Available | Negative | 238946 - 239800 | 30820.2 |
| para family protein | PviCFBP13515_01210 | Not Available | Negative | 239903 - 240691 | 28442.6 |
| flagellar motor protein motd | PviCFBP13515_01215 | Not Available | Negative | 240736 - 241623 | 32146.1 |
| flagellar motor protein | PviCFBP13515_01220 | Not Available | Negative | 241630 - 242370 | 26044.3 |
| chemotaxis response regulator protein-glutamate methylesterase | PviCFBP13515_01225 | Not Available | Negative | 242370 - 243542 | 41216.0 |
| chemotaxis protein chea | PviCFBP13515_01230 | Not Available | Negative | 243594 - 245852 | 79822.3 |
| protein phosphatase chez | PviCFBP13515_01235 | Not Available | Negative | 245886 - 246671 | 29390.5 |
| chemotaxis protein chey | PviCFBP13515_01240 | Not Available | Negative | 246691 - 247077 | 14433.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
