Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | PviCFBP13515_01145 | Not Available | Positive | 228671 - 229123 | 16631.1 |
| cytochrome c oxidase accessory protein ccog | PviCFBP13515_01150 | Not Available | Positive | 229148 - 230563 | 53439.8 |
| hypothetical protein | PviCFBP13515_01155 | Not Available | Positive | 230574 - 231113 | 20038.7 |
| cadmium-translocating p-type atpase | PviCFBP13515_01160 | Not Available | Positive | 231115 - 233568 | 88074.9 |
| cbb3-type cytochrome oxidase assembly protein ccos | PviCFBP13515_01165 | Not Available | Positive | 233547 - 233765 | 7820.18 |
| sulfite exporter taue/safe family protein | PviCFBP13515_01170 | Not Available | Positive | 233774 - 234457 | 24378.8 |
| oxygen-independent coproporphyrinogen iii oxidase | PviCFBP13515_01175 | Not Available | Positive | 234563 - 235945 | 52594.9 |
| chemotaxis protein | PviCFBP13515_01180 | Not Available | Negative | 235960 - 236427 | 16181.5 |
| fumarate/nitrate reduction transcriptional regulator fnr | PviCFBP13515_01185 | Not Available | Positive | 236579 - 237313 | 27186.8 |
| adenine phosphoribosyltransferase | PviCFBP13515_01190 | Not Available | Positive | 237377 - 237925 | 20086.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
