Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | PviCFBP13515_00995 | Not Available | Positive | 194792 - 195262 | 17478.0 |
| hypothetical protein | PviCFBP13515_01000 | Not Available | Positive | 195389 - 196582 | 41120.4 |
| ld-carboxypeptidase | PviCFBP13515_01005 | Not Available | Negative | 196588 - 197523 | 32357.0 |
| nadp-dependent oxidoreductase | PviCFBP13515_01010 | Not Available | Positive | 197751 - 198761 | 36006.6 |
| orotidine-5'-phosphate decarboxylase | PviCFBP13515_01015 | Not Available | Negative | 198911 - 199645 | 25965.7 |
| ethanolamine permease | PviCFBP13515_01020 | Not Available | Positive | 199938 - 201302 | 48085.2 |
| duf2897 domain-containing protein | PviCFBP13515_01025 | Not Available | Positive | 201430 - 201597 | 6337.91 |
| amino acid abc transporter substrate-binding protein | PviCFBP13515_01030 | Not Available | Negative | 201638 - 202465 | 31198.4 |
| exonuclease | PviCFBP13515_01035 | Not Available | Positive | 202736 - 203278 | 20911.0 |
| duf1255 domain-containing protein | PviCFBP13515_01040 | Not Available | Positive | 203455 - 203736 | 10289.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
