Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | PviCFBP13515_00945 | Not Available | Negative | 188201 - 189109 | 34032.2 |
| cysteine hydrolase | PviCFBP13515_00950 | Not Available | Positive | 189369 - 189959 | 21007.5 |
| hypothetical protein | PviCFBP13515_00955 | Not Available | Positive | 190096 - 190416 | 11246.0 |
| dna mismatch repair protein muts | PviCFBP13515_00960 | Not Available | Positive | 190462 - 191019 | 20872.2 |
| hypothetical protein | PviCFBP13515_00965 | Not Available | Negative | 191046 - 191210 | 5332.48 |
| gtp cyclohydrolase i fole | PviCFBP13515_00970 | Not Available | Positive | 191409 - 191981 | 21102.8 |
| glutaredoxin | PviCFBP13515_00975 | Not Available | Positive | 192057 - 192422 | 13700.8 |
| duf1311 domain-containing protein | PviCFBP13515_00980 | Not Available | Negative | 192442 - 192828 | 14166.1 |
| glutathione s-transferase family protein | PviCFBP13515_00985 | Not Available | Negative | 192896 - 193498 | 23001.6 |
| plp-dependent aminotransferase family protein | PviCFBP13515_00990 | Not Available | Negative | 193544 - 194710 | 43085.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
