Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | PviCFBP13515_09560 | Not Available | Positive | 2147573 - 2149855 | 79939.7 |
| Tail/dna circulation protein | PviCFBP13515_09565 | Not Available | Positive | 2149852 - 2151297 | 50675.9 |
| Putative tail protein | PviCFBP13515_09570 | Not Available | Positive | 2151301 - 2152407 | 40075.4 |
| Putative base plate assembly protein | PviCFBP13515_09575 | Not Available | Positive | 2152404 - 2152913 | 17977.5 |
| Putative tail protein | PviCFBP13515_09580 | Not Available | Positive | 2152913 - 2153311 | 15312.1 |
| Baseplate protein | PviCFBP13515_09585 | Not Available | Positive | 2153301 - 2154341 | 36940.7 |
| Tail protein | PviCFBP13515_09590 | Not Available | Positive | 2154329 - 2154928 | 22311.7 |
| Tail protein | PviCFBP13515_09595 | Not Available | Positive | 2154939 - 2156768 | 64189.9 |
| Putative tail fiber assembly protein | PviCFBP13515_09600 | Not Available | Positive | 2156786 - 2157328 | 19834.3 |
| Glycoside hydrolase family 19 protein | PviCFBP13515_09605 | Not Available | Positive | 2157340 - 2157885 | 19890.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
