Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13515_00745 | Not Available | Negative | 152070 - 152276 | 7962.46 |
| transcription elongation factor greab | PviCFBP13515_00750 | Not Available | Negative | 152392 - 152874 | 17846.1 |
| hypothetical protein | PviCFBP13515_00755 | Not Available | Negative | 152878 - 153264 | 14481.4 |
| elongation factor p maturation arginine rhamnosyltransferase earp | PviCFBP13515_00760 | Not Available | Positive | 153418 - 154551 | 42953.8 |
| elongation factor p | PviCFBP13515_00765 | Not Available | Positive | 154651 - 155220 | 21139.1 |
| alpha/beta hydrolase | PviCFBP13515_00770 | Not Available | Negative | 155299 - 156318 | 36434.5 |
| organic hydroperoxide resistance protein | PviCFBP13515_00775 | Not Available | Negative | 156344 - 156763 | 14214.9 |
| hypothetical protein | PviCFBP13515_00780 | Not Available | Positive | 156884 - 157168 | 10886.7 |
| marr family transcriptional regulator | PviCFBP13515_00785 | Not Available | Negative | 157449 - 157922 | 17223.9 |
| sulfite exporter taue/safe family protein | PviCFBP13515_00790 | Not Available | Positive | 158141 - 158872 | 25688.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
