Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s1 | PviCFBP13515_00695 | Not Available | Positive | 140393 - 142078 | 62018.6 |
| integration host factor subunit beta | PviCFBP13515_00700 | Not Available | Positive | 142375 - 142671 | 11042.3 |
| duf1049 domain-containing protein | PviCFBP13515_00705 | Not Available | Positive | 142695 - 142946 | 9210.86 |
| mbl fold metallo-hydrolase | PviCFBP13515_00710 | Not Available | Positive | 143344 - 144774 | 52192.5 |
| nad-dependent dehydratase | PviCFBP13515_00715 | Not Available | Positive | 144990 - 145967 | 35556.0 |
| glycosyl transferase | PviCFBP13515_00720 | Not Available | Positive | 145960 - 146976 | 36128.0 |
| polysaccharide biosynthesis protein | PviCFBP13515_00725 | Not Available | Positive | 147075 - 149069 | 73681.5 |
| helix-hairpin-helix domain-containing protein | PviCFBP13515_00730 | Not Available | Positive | 149228 - 149560 | 11744.0 |
| tetr/acrr family transcriptional regulator | PviCFBP13515_00735 | Not Available | Negative | 149613 - 150233 | 22923.3 |
| haaap family serine/threonine permease | PviCFBP13515_00740 | Not Available | Positive | 150550 - 151827 | 46074.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
