Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin family protein | PviCFBP13515_00595 | Not Available | Negative | 116409 - 117023 | 23106.0 |
| class ii fumarate hydratase | PviCFBP13515_00600 | Not Available | Negative | 117016 - 118410 | 49124.9 |
| duf2059 domain-containing protein | PviCFBP13515_00605 | Not Available | Positive | 118580 - 119107 | 18807.9 |
| bola family transcriptional regulator | PviCFBP13515_00610 | Not Available | Positive | 119120 - 119413 | 10674.7 |
| rhodanese domain-containing protein | PviCFBP13515_00615 | Not Available | Positive | 119584 - 120534 | 35755.2 |
| dsba family protein | PviCFBP13515_00620 | Not Available | Positive | 120538 - 121170 | 23072.3 |
| abc transporter atp-binding protein | PviCFBP13515_00625 | Not Available | Positive | 121163 - 122989 | 66777.0 |
| ggdef domain-containing protein | PviCFBP13515_00630 | Not Available | Positive | 123112 - 125574 | 91091.5 |
| tena family transcriptional regulator | PviCFBP13515_00635 | Not Available | Positive | 125605 - 126390 | 29946.7 |
| ggdef domain-containing protein | PviCFBP13515_00640 | Not Available | Negative | 126425 - 127351 | 34530.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
