Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | PviCFBP13515_00545 | Not Available | Positive | 107649 - 108200 | 20139.2 |
| long-chain fatty acid transport protein | PviCFBP13515_00550 | Not Available | Negative | 108463 - 109746 | 45702.2 |
| hypothetical protein | PviCFBP13515_00555 | Not Available | Negative | 109897 - 110376 | 17727.6 |
| hypothetical protein | PviCFBP13515_00560 | Not Available | Negative | 110654 - 110878 | 8345.02 |
| hypothetical protein | PviCFBP13515_00565 | Not Available | Negative | 111360 - 111665 | 10803.6 |
| dna recombination protein rmuc | PviCFBP13515_00570 | Not Available | Positive | 112317 - 113795 | 55590.9 |
| hypothetical protein | PviCFBP13515_00575 | Not Available | Positive | 113972 - 114094 | 4748.83 |
| hypothetical protein | PviCFBP13515_00580 | Not Available | Negative | 114205 - 114519 | 12093.5 |
| dtw domain-containing protein | PviCFBP13515_00585 | Not Available | Positive | 114726 - 115328 | 21945.6 |
| eama/rhat family transporter | PviCFBP13515_00590 | Not Available | Positive | 115443 - 116402 | 34631.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
