Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate transporter subunit madm | PviCFBP13515_04960 | Not Available | Negative | 1047445 - 1048209 | 25606.1 |
| malonate transporter subunit madl | PviCFBP13515_04965 | Not Available | Negative | 1048215 - 1048610 | 13414.1 |
| malonate decarboxylase subunit epsilon | PviCFBP13515_04970 | Not Available | Negative | 1048683 - 1049615 | 32866.6 |
| phosphoribosyl-dephospho-coa transferase | PviCFBP13515_04975 | Not Available | Negative | 1049612 - 1050238 | 22341.1 |
| biotin-independent malonate decarboxylase subunit gamma | PviCFBP13515_04980 | Not Available | Negative | 1050244 - 1051044 | 28359.9 |
| biotin-independent malonate decarboxylase subunit beta | PviCFBP13515_04985 | Not Available | Negative | 1051041 - 1051892 | 29949.7 |
| malonate decarboxylase subunit delta | PviCFBP13515_04990 | Not Available | Negative | 1051885 - 1052184 | 10733.9 |
| triphosphoribosyl-dephospho-coa synthase mdcb | PviCFBP13515_04995 | Not Available | Negative | 1052186 - 1053073 | 30719.8 |
| malonate decarboxylase subunit alpha | PviCFBP13515_05000 | Not Available | Negative | 1053073 - 1054749 | 61399.9 |
| para family protein | PviCFBP13515_05010 | Not Available | Negative | 1055343 - 1056122 | 29061.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
