Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylenetetrahydrofolate reductase | PviCFBP13515_04905 | Not Available | Positive | 1036249 - 1037094 | 31423.2 |
| dead/deah box helicase | PviCFBP13515_04910 | Not Available | Positive | 1037406 - 1039310 | 68418.4 |
| hypothetical protein | PviCFBP13515_04915 | Not Available | Negative | 1039247 - 1039492 | 9207.55 |
| ycei family protein | PviCFBP13515_04920 | Not Available | Negative | 1039659 - 1040237 | 20575.3 |
| cytochrome b | PviCFBP13515_04925 | Not Available | Negative | 1040265 - 1040813 | 20107.1 |
| amine oxidase | PviCFBP13515_04935 | Not Available | Negative | 1041128 - 1042990 | 66825.9 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | PviCFBP13515_04940 | Not Available | Positive | 1043200 - 1044606 | 52695.2 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | PviCFBP13515_04945 | Not Available | Positive | 1044763 - 1045482 | 26545.8 |
| hemolysin iii | PviCFBP13515_04950 | Not Available | Negative | 1045690 - 1046304 | 22609.4 |
| lysr family transcriptional regulator | PviCFBP13515_04955 | Not Available | Positive | 1046459 - 1047388 | 34775.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
