Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13515 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate transporter dcta | PviCFBP13515_00340 | Not Available | Positive | 68150 - 69532 | 48621.9 |
| sprt family zinc-dependent metalloprotease | PviCFBP13515_00345 | Not Available | Negative | 69596 - 70090 | 19330.2 |
| yip1 family protein | PviCFBP13515_00350 | Not Available | Negative | 70212 - 70811 | 21698.8 |
| trna 2-thiocytidine(32) synthetase ttca | PviCFBP13515_00355 | Not Available | Positive | 71031 - 71855 | 31072.7 |
| 3-methyladenine dna glycosylase | PviCFBP13515_00360 | Not Available | Negative | 71862 - 72533 | 25369.6 |
| duf2069 domain-containing protein | PviCFBP13515_00365 | Not Available | Negative | 72572 - 72988 | 15444.5 |
| nad(p)h:quinone oxidoreductase | PviCFBP13515_00370 | Not Available | Negative | 72981 - 73586 | 21244.6 |
| arsenate reductase (glutaredoxin) | PviCFBP13515_00375 | Not Available | Negative | 73583 - 73936 | 12817.7 |
| tlpa family protein disulfide reductase | PviCFBP13515_00380 | Not Available | Positive | 74068 - 74535 | 16910.3 |
| meta domain-containing protein | PviCFBP13515_00385 | Not Available | Negative | 74787 - 75194 | 15184.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
