Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | ALP40_02570 | Not Available | Positive | 1010088 - 1011059 | 36536.6 |
| cytochrome | ALP40_02571 | Not Available | Negative | 1011097 - 1011660 | 21738.0 |
| putative protein-dependent aldehyde dehydrogenase | ALP40_02572 | Not Available | Negative | 1011754 - 1013208 | 51502.5 |
| 4-aminobutyrate aminotransferase | ALP40_02573 | Not Available | Negative | 1013252 - 1014628 | 49019.0 |
| arac family regulatory protein | ALP40_02574 | Not Available | Positive | 1014776 - 1015801 | 38370.2 |
| amino acid transporter | ALP40_02575 | Not Available | Positive | 1016240 - 1017688 | 51026.8 |
| aldehyde dehydrogenase | ALP40_02576 | Not Available | Positive | 1017779 - 1019200 | 51002.3 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | ALP40_02577 | Not Available | Positive | 1019212 - 1020561 | 48610.4 |
| hypothetical protein | ALP40_02578 | Not Available | Positive | 1020649 - 1021974 | 47915.5 |
| hypothetical protein | ALP40_02579 | Not Available | Positive | 1023052 - 1024593 | 53900.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
