Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | ALP40_04984 | Not Available | Negative | 965623 - 966954 | 48651.4 |
| 4-hydroxyphenylpyruvate dioxygenase | ALP40_04986 | Not Available | Positive | 967466 - 969457 | 73034.4 |
| tetr family transcriptional regulator | ALP40_02527 | Not Available | Positive | 969568 - 970239 | 25555.5 |
| shikimate dehydrogenase | ALP40_02528 | Not Available | Negative | 970243 - 971097 | 30119.3 |
| pseudouridine synthase | ALP40_04987 | Not Available | Positive | 971272 - 972177 | 34355.1 |
| putative lipoprotein | ALP40_02530 | Not Available | Negative | 972250 - 972474 | 8186.8 |
| molybdopterin-guanine dinucleotide biosynthesis protein moba | ALP40_04991 | Not Available | Negative | 972548 - 973153 | 22178.0 |
| molybdenum cofactor biosynthesis protein | ALP40_04988 | Not Available | Positive | 972975 - 973769 | 28527.2 |
| molybdopterin biosynthesis protein moea | ALP40_02531 | Not Available | Positive | 973776 - 974987 | 43211.1 |
| glycosyl transferase protein | ALP40_02532 | Not Available | Positive | 975071 - 975997 | 34886.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
