Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| assimilatory nitrate reductase electron transfer subunit domain protein | ALP40_02496 | Not Available | Negative | 928974 - 930203 | 44266.6 |
| serine/threonine protein kinase | ALP40_02497 | Not Available | Negative | 930578 - 932239 | 61527.6 |
| nitrate transporter | ALP40_02498 | Not Available | Negative | 932246 - 933463 | 42808.1 |
| levansucrase | ALP40_02499 | Not Available | Positive | 934373 - 935623 | 46117.1 |
| response regulator receiver:antar | ALP40_02500 | Not Available | Negative | 935846 - 936427 | 21812.8 |
| hypothetical protein | ALP40_02501 | Not Available | Negative | 936436 - 937779 | 48905.8 |
| dihydroorotate dehydrogenase | ALP40_04975 | Not Available | Positive | 937857 - 938930 | 37576.7 |
| ribosome modulation factor | ALP40_100094 | Not Available | Negative | 939072 - 939287 | 8192.81 |
| ribosomal rna large subunit methyltransferase k/l | ALP40_02503 | Not Available | Positive | 939876 - 942131 | 84787.2 |
| chase domain-containing protein/sensory box histidine kinase | ALP40_02504 | Not Available | Positive | 942270 - 944648 | 88693.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
