Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP40_02456 | Not Available | Positive | 877538 - 878944 | 51426.5 |
| redox-sensitive transcriptional activator | ALP40_02457 | Not Available | Negative | 878956 - 879417 | 16796.4 |
| antibiotic biosynthesis monooxygenase | ALP40_02458 | Not Available | Positive | 879506 - 879841 | 12483.7 |
| sigma-54 dependent transcriptional regulator | ALP40_02459 | Not Available | Negative | 879851 - 880957 | 41355.0 |
| alkanesulfonate monooxygenase | ALP40_04960 | Not Available | Negative | 880957 - 882189 | 44853.6 |
| non--like proteinous end joining protein ku | ALP40_04961 | Not Available | Positive | 882292 - 883329 | 38249.0 |
| atp-dependent dna ligase | ALP40_02462 | Not Available | Positive | 883350 - 885938 | 95655.6 |
| aldo/keto reductase | ALP40_02463 | Not Available | Positive | 886036 - 887022 | 35783.2 |
| phosphatidylserine synthase | ALP40_04963 | Not Available | Negative | 887076 - 888467 | 52491.0 |
| tonb-dependent siderophore receptor | ALP40_02465 | Not Available | Positive | 888799 - 890994 | 78849.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
