Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP40_02445 | Not Available | Positive | 866935 - 868446 | 54833.5 |
| hypothetical protein | ALP40_02446 | Not Available | Negative | 868491 - 868727 | 8996.6 |
| hypothetical protein | ALP40_02447 | Not Available | Positive | 869172 - 869639 | 17206.7 |
| monovalent cation/h+ antiporter subunit g | ALP40_04955 | Not Available | Negative | 869659 - 870222 | 20513.2 |
| putative monovalent cation/h+ antiporter subunit e | ALP40_02450 | Not Available | Negative | 870311 - 870799 | 18231.2 |
| monovalent cation/h+ antiporter subunit d | ALP40_02451 | Not Available | Negative | 870796 - 872481 | 59840.4 |
| monovalent cation/h+ antiporter subunit c | ALP40_02452 | Not Available | Negative | 872478 - 872822 | 12276.4 |
| monovalent cation/h+ antiporter subunit a | ALP40_04957 | Not Available | Negative | 872822 - 875740 | 105715.0 |
| hypothetical protein | ALP40_04958 | Not Available | Negative | 875898 - 877016 | 39677.1 |
| dna-binding protein | ALP40_04959 | Not Available | Positive | 876726 - 877496 | 28698.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
