Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | ALP40_04946 | Not Available | Negative | 818463 - 819923 | 53895.7 |
| capsular polysaccharide biosynthesis protein psla | ALP40_02409 | Not Available | Negative | 819920 - 821356 | 54151.8 |
| lipid kinase | ALP40_02410 | Not Available | Positive | 821877 - 822797 | 32312.7 |
| dna-binding response regulator, luxr family | ALP40_100069 | Not Available | Negative | 822781 - 823443 | 24341.0 |
| hypothetical protein | ALP40_02411 | Not Available | Negative | 824728 - 825159 | 15770.6 |
| chemotaxis protein chev | ALP40_02412 | Not Available | Positive | 825712 - 826665 | 35230.4 |
| mosc domain-containing protein | ALP40_02413 | Not Available | Positive | 826714 - 827568 | 31517.1 |
| soluble lytic murein transglycosylase | ALP40_04948 | Not Available | Negative | 827911 - 829899 | 75968.5 |
| abc transporter atp-binding protein | ALP40_02415 | Not Available | Positive | 830032 - 831954 | 70740.1 |
| universal stress protein | ALP40_04950 | Not Available | Negative | 832016 - 832519 | 18470.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
