Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein lysr | ALP40_04943 | Not Available | Positive | 805794 - 806711 | 33184.3 |
| membrane protein pslk | ALP40_02399 | Not Available | Negative | 807068 - 808477 | 49177.9 |
| transferase, hexapeptide repeat protein | ALP40_02400 | Not Available | Negative | 808492 - 809313 | 30475.2 |
| membrane protein pslj | ALP40_02401 | Not Available | Negative | 809310 - 810725 | 51140.8 |
| group 1 glycosyl transferase | ALP40_02402 | Not Available | Negative | 810725 - 811825 | 41097.5 |
| glycosyl transferase, group 1 protein pslh | ALP40_02403 | Not Available | Negative | 811809 - 813032 | 46088.2 |
| glycosyl hydrolase | ALP40_04945 | Not Available | Negative | 813035 - 814387 | 50027.7 |
| group 1 glycosyl transferase | ALP40_02405 | Not Available | Negative | 814350 - 815528 | 43337.7 |
| exopolysaccharide biosynthesis protein | ALP40_02406 | Not Available | Negative | 815528 - 817519 | 74749.1 |
| polysaccharide biosynthesis/export protein | ALP40_02407 | Not Available | Negative | 817537 - 818313 | 27341.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
