Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP40_02368 | Not Available | Negative | 773302 - 773721 | 14909.5 |
| hypothetical protein | ALP40_02369 | Not Available | Negative | 773721 - 774458 | 25481.9 |
| carbon storage regulator -like protein | ALP40_02370 | Not Available | Negative | 774706 - 774894 | 6878.42 |
| gluconate permease | ALP40_02371 | Not Available | Negative | 775451 - 776803 | 47550.4 |
| gluconokinase | ALP40_02372 | Not Available | Negative | 776900 - 777427 | 18556.2 |
| gluconate utilization system gnt-i transcriptional repressor | ALP40_04934 | Not Available | Positive | 777593 - 778687 | 39118.0 |
| hypothetical protein | ALP40_02374 | Not Available | Positive | 778863 - 779960 | 39914.7 |
| malate synthase g | ALP40_04936 | Not Available | Negative | 780085 - 782346 | 83196.6 |
| glcg protein | ALP40_02376 | Not Available | Negative | 782350 - 782757 | 13947.6 |
| glycolate oxidase iron-sulfur subunit | ALP40_02377 | Not Available | Negative | 782790 - 784016 | 44647.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
